GWIPS-viz Forums

Full Version: Global aggregate for mRNA coverage
You're currently viewing a stripped down version of our content. View the full version with proper formatting.
Hi,

I am trying to download global aggregate coverage bedgraph file for mRNA-seq reads for human hg38 from your download tab. I selected "All Tables" in the Table tab but the downloaded file was Cenik_all_mRNAcov_track instead.

Can you please let me know how i can download the aggregate file for mRNA-seq?

Thanks!
Hi,

Due to changes in the browser settings, it is not currently possible to download the mRNA-seq Global aggregate table in bedgraph format. It is, however, possible to download it in bigWig format from the Downloads page (see screenshot mRNA-seq_Global_aggregate_bigWig_format.png attached).

Alternatively the aggregate of individual studies the can be downloaded from the Table Browser page in bedGraph format (see screenshot Table_Browser_mRNA-seq_bedGraph.png).

Apologies for the inconvenience,
Audrey
Reference URL's