Post Reply 
 
Thread Rating:
  • 0 Votes - 0 Average
  • 1
  • 2
  • 3
  • 4
  • 5
Docker version of RiboGalaxy
15-May-2018, 12:06 PM
Post: #5
RE: Docker version of RiboGalaxy
Hi,
I've been using the ribogalaxy docker and it was all running ok until today when I ran a Triplet periodicity and a Metagene analysis which appeared to have worked (green) but had the message "Fontconfig error: Cannot load default config file". When I try the next steps (plot ribosome profile and differential translation analysis) they start running but fail -differential translation analysis was running for ~2h before failing). The error message says
"Error in .local(.Object, ...) :
All vectors in '@groups' slot must equal number of columns of '@data' slot.
Fatal error: Exit code 1 (Error)
Traceback (most recent call last):
File "/shed_tools/toolshed.ribogalaxy.ucc.ie/repos/ribogalaxy/riboseqr_wr"

Anyone having an idea of why that happens or had the same issue?

Thanks for any advice,

Katerina
Find all posts by this user
Quote this message in a reply
Post Reply 


Messages In This Thread
Docker version of RiboGalaxy - jamesp - 20-Sep-2017, 10:36 AM
RE: Docker version of RiboGalaxy - audrey - 08-Mar-2018, 03:56 PM
RE: Docker version of RiboGalaxy - Katerina-D - 15-May-2018 12:06 PM
RE: Docker version of RiboGalaxy - jamesp - 21-May-2018, 11:50 AM

Forum Jump:


User(s) browsing this thread: 1 Guest(s)

GWIPS-viz | Return to Top | Return to Content | Light (Archive) Mode | RSS Syndication