GWIPS-viz Genome Browser on Human Dec. 2013 (GRCh38/hg38) Assembly
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chr9:136,848,259-136,851,600 3,342 bp.
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-   Small Ribosomal Subunits (Footprints)
HEK: Wagner20
-   Initiating Ribosomes (P-site)
Global Aggregate
BJ/MCF10A:Ji 2015
HCT116: Fijalkowska17
HCT116:Crappe 2015
HEK293: Gao14
HEK: Zhang17
iPSC: Chen20
Jurkat: Gawron 2016
LCL :Raj 2016
-   Elongating Ribosomes (A-site)
Global Aggregate
BJ/MCF10A:Ji 2015
Blood: Mills16
Erythroid: Khajuria18
Fibroblast: Tirosh 2015
Fibroblast:Xu 2016
Flp-In T-REx-293: Malecki17
HAP1: Jakobsson17
HCT116: Fijalkowska17
HCT116:Crappe 2015
HEK293: Clamer18
HEK293: Gao14
HEK293: Iwasaki19
HEK: Andreev15
HEK: Calviello 2016
HEK: Ingolia12
HEK: Iwasaki 2016
HEK: Oh16
HEK: Park17
HEK: Sidrauski 2015
HEK: Wagner20
HEK: Zhang17
HeLa :Park 2016
HeLa: Arango18
HeLa: Niu 2013
HeLa: Shi17
HeLa: Yoon 2014
HeLa:Zur 2016
hESC: Werner 2015
hTERT-RPE-1: Haas20
iPSC: Chen20
Jurkat: Gawron 2016
KOPT-K1: Wolfe 2014
LCL: Battle 2015
LCL: Cenik 2015
Lymphocytes: Reid 2015
MCF10A-ER-Src: Gameiro18
MCF7: Lauria18
MCF7: LoayzaPuch16
MDA-MB-231: Rubio 2014
Monocytes :Su 2015
Muscle:Wein 2014
Myeloma:Wiita 2013
RPE1: Tanenbaum 2015
U20S :Guo 2014
U2OS: Elkon 2015
U2OS: Jang 2015
-   Elongating Ribosomes (Footprints)
Global Aggregate
BJ/MCF10A:Ji 2015
Blood: Mills16
Erythroid: Khajuria18
Fibroblast: Tirosh 2015
Fibroblast:Xu 2016
Flp-In T-REx-293: Malecki17
HAP1: Jakobsson17
HCT116: Fijalkowska17
HCT116:Crappe 2015
HEK293: Clamer18
HEK293: Gao14
HEK293: Iwasaki19
HEK: Andreev15
HEK: Calviello 2016
HEK: Ingolia12
HEK: Iwasaki 2016
HEK: Oh16
HEK: Park17
HEK: Sidrauski 2015
HEK: Wagner20
HEK: Zhang17
HeLa :Park 2016
HeLa: Arango18
HeLa: Niu 2013
HeLa: Shi17
HeLa: Yoon 2014
HeLa:Zur 2016
hESC: Werner 2015
hTERT-RPE-1: Haas20
iPSC: Chen20
Jurkat: Gawron 2016
KOPT-K1: Wolfe 2014
LCL :Raj 2016
LCL: Battle 2015
LCL: Cenik 2015
Lymphocytes: Reid 2015
MCF10A-ER-Src: Gameiro18
MCF7: Lauria18
MCF7: LoayzaPuch16
MDA-MB-231: Rubio 2014
Monocytes :Su 2015
Muscle:Wein 2014
Myeloma:Wiita 2013
RPE1: Tanenbaum 2015
U20S :Guo 2014
U2OS: Elkon 2015
U2OS: Jang 2015
-   mRNA-seq Reads
Global Aggregate
BJ/MCF10A:Ji 2015
Erythroid: Khajuria18
Fibroblast: Tirosh 2015
Fibroblast:Xu 2016
HAP1: Jakobsson17
HCT116: Fijalkowska17
HEK293: Gao14
HEK: Andreev15
HEK: Iwasaki 2016
HEK: Oh16
HEK: Park17
HEK: Sidrauski 2015
HEK: Wagner20
HeLa :Park 2016
HeLa: Arango18
HeLa: Niu 2013
HeLa: Shi17
HeLa:Zur 2016
hESC: Werner 2015
hTERT-RPE-1: Haas20
iPSC: Chen20
KOPT-K1: Wolfe 2014
LCL: Battle 2015
LCL: Cenik 2015
MCF10A-ER-Src: Gameiro18
MCF7: Lauria18
MDA-MB-231: Rubio 2014
Monocytes :Su 2015
Muscle:Wein 2014
Myeloma:Wiita 2013
RPE1: Tanenbaum 2015
U20S :Guo 2014
U2OS: Elkon 2015
U2OS: Jang 2015
-   Mapping and Sequencing
Base Position
Short Match
-   Annotation Tracks and External Data
Cons Primates
Conservation
phyloP 100way
NCBI RefSeq
RefSeq Genes
CCDS
GENCODE (Ensembl)
MANE v1.0
Mappability